| |
Family |
Scientific Name |
Common Name |
|
| CICHLIDAE | Cichlasoma nigrofasciatum | Convict Cichlid (introduced) |
| CICHLIDAE | Cichlasoma octofasciatum | Jack Dempsy Cichlid (introduced)  |
| CICHLIDAE | Oreochromis mossambicus | Mozambique Mouthbrooder (introduced) |
| CICHLIDAE | Pseudotrophus zebra | zebra cichlid (introduced) |
| CICHLIDAE | Tilapia mariae | Tilapia (introduced) |
| CICHLIDAE | Tilapia zillii | Zilles Cichlid (introduced) |
| CLARIIDAE | Clarius batrachus | Walking Catfish (introduced) |
| CLUPEIDAE | Clupeoides papuensis | Toothed River Herring  |
| CLUPEIDAE | Clupeoides venulosus | West Irian River Sprat |
| CLUPEIDAE | Escualosa thoracata | White Sardine |
| CLUPEIDAE | Nematalosa erebi | Bony Bream |
| CLUPEIDAE | Nematalosa flyensis | Fly River Herring |
| CLUPEIDAE | Nematalosa papuensis | Strickland River Herring |
| CLUPEIDAE | Potamalosa richmondia | Freshwater Herring |
| COBIDITAE | Misgurnus anguillicaudatus | Oriental Weather Loach (introduced) |
| CYNOGLOSSIDAE | Cynoglossus heterolepis | Freshwater Tongue Sole |
| CYPRINIDAE | Carassius auratus | Goldfish (introduced) |
| CYPRINIDAE | Cyprinus carpio | Carp (introduced) |
| CYPRINIDAE | Puntius conchonius | Rosy Barb (introduced) |
| CYPRINIDAE | Rutilus rutilus | Roach (introduced) |
| CYPRINIDAE | Tanichthys albonubes | White Cloud Mountain Minnow (introduced) |
| CYPRINIDAE | Tinca tinca | Tench (introduced) |
| DASYATIDAE | Dasyatis fluviorum | Estuary Stingray |
| DASYATIDAE | Himantura dalyensis | Freshwater Whipray |
| DATNIOIDIDAE | Datnioides quadrifasciatus | Four Banded Tigerfish |
| ELEOTRIDAE | Belobranchus belobranchus | Throatspine Gudgeon |
| ELEOTRIDAE | Bostrichthys aruensis | Island Gudgeon |
| ELEOTRIDAE | Bostrichthys strigogenys | Stripe-Cheeked Gudgeon |
| ELEOTRIDAE | Bostrichthys zonatus | Barred Gudgeon, Sunset Gudgeon |
| ELEOTRIDAE | Bunaka gyrinoides | Greenback Gauvina |
| ELEOTRIDAE | Butis amboiensis | Ambon Gudgeon |
| ELEOTRIDAE | Butis butis | Crimson-tipped Gudgeon |
| ELEOTRIDAE | Butis melanostigma | Black Spotted Gudgeon |
| ELEOTRIDAE | Eleotris aquadulcis | Freshwater Gudgeon |
| ELEOTRIDAE | Eleotris fusca | Brown Gudgeon |
| ELEOTRIDAE | Eleotris melanosoma | Ebony Gudgeon |
| ELEOTRIDAE | Giurus margaritacea | Snake Head Gudgeon, Rainbow Mudcod |
| ELEOTRIDAE | Gobiomorphus australis | Striped Gudgeon |
| ELEOTRIDAE | Gobiomorphus coxii | Cox`s Gudgeon |
| ELEOTRIDAE | Hypseleotris aurea | Golden Gudgeon |
| ELEOTRIDAE | Hypseleotris burrawayi | Burraway's Carp Gudgeon |
| ELEOTRIDAE | Hypseleotris compressa | Empire Gudgeon |
| ELEOTRIDAE | Hypseleotris ejuncida | Slender Gudgeon |
| ELEOTRIDAE | Hypseleotris galii | Firetail Gudgeon |
| ELEOTRIDAE | Hypseleotris guentheri | Rainbow Prigi |
| ELEOTRIDAE | Hypseleotris kimberleyensis | Barnett River Gudgeon |
| ELEOTRIDAE | Hypseleotris klunzingeri | Western Carp Gudgeon |
| ELEOTRIDAE | Hypseleotris regalis | Prince Regent Gudgeon |
| ELEOTRIDAE | Hypseleotris sp_1 | Midgley`s Carp Gudgeon |
| ELEOTRIDAE | Hypseleotris sp_2 | Lake`s Carp Gudgeon |
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